
Shipei Xing
Assistant Professor-A
Environmental Health
Email: sxing@fudan.edu.cn
Research interest: Metabolomics, Exposomics, Mass spectrometry informatics
Group page: xing-lab.org
2014. 9 – 2018.6 Zhejiang University, Chu Kochen Honors College, BSc in Chemistry
2019.1 – 2023.5 The University of British Columbia, PhD in Chemistry
2023.8 – 2026.7 University of California, San Diego, Postdoctoral Scholar (Supervisor: Pieter C. Dorrestein)
2026.8 – Present Fudan University, Assistant Professor-A
1.Mass spectrometry informatics (algorithm development, workflow construction etc.)
2.Molecular discovery based on public mass spectrometry data mining
3.Microbial metabolism of xenobiotics
See more details at xing-lab.org/research
•Excellent Young Scientists Fund (Overseas), National Natural Science Foundation of China
•Start-up Funds under Fudan University Talent Recruitment Program
1.Shipei Xing, Sam Shen, Banghua Xu, Xiaoxiao Li, Tao Huan. BUDDY: molecular formula discovery via bottom-up MS/MS interrogation. Nature Methods, 2023.
2.Shipei Xing, Abubaker Patan, Julius Agongo, Harsha Gouda, Vincent Charron-Lamoureux, Yasin El Abiead, Zhewen Hu, Haoqi Nina Zhao, Ipsita Mohanty, Jasmine Zemlin, Wilhan Donizete Gonçalves Nunes, Lindsey A. Burnett, Mingxun Wang, Dionicio Siegel, Pieter C. Dorrestein. Navigating the conjugated metabolome. bioRxiv, in revision at Nature, 2026.
3.Shipei Xing, Vincent Charron-Lamoureux, Haoqi Zhao, Yasin El Abiead, Mingxun Wang, Pieter C. Dorrestein. Reverse spectral search reimagined: a simple but overlooked solution for chimeric spectral annotation. Analytical Chemistry, 2025.
4.Shipei Xing, Yibo Jiao, Melody Salehzadeh, Kiran K. Soma, Tao Huan. SteroidXtract: deep learning-based pattern recognition enables comprehensive and rapid extraction of steroid-like metabolic features for automated biology-driven metabolomics. Analytical Chemistry, 2021.
5.Shipei Xing, Yan Hu, Zixuan Yin, Min Liu, Xiaoyu Tang, Mingliang Fang, Tao Huan. Retrieving and utilizing hypothetical neutral losses from tandem mass spectra for spectral similarity analysis and unknown metabolite annotation. Analytical Chemistry, 2020.
6.Shipei Xing, Tao Huan. Radical fragment ions in collision-induced dissociation-based tandem mass spectrometry. Analytica Chimica Acta, 2022.
7.Shipei Xing, Huaxu Yu, Min Liu, Qingquan Jia, Zhi Sun, Mingliang Fang, Tao Huan. Recognizing contamination fragment ions in liquid chromatography-tandem mass spectrometry data. Journal of the American Society for Mass Spectrometry, 2021. (invited)